Sequence databases
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[edit] Sequence databases - Web Resources
Viral Bioinformatics Canada: VBRC-University of Victoria is an online resource providing access to curated viral genomes and a variety of tools for comparative genomic analyses. The resource includes tools such as VOCs
, JDotter, Base-by-Base, VGO, GraphDNA, JIPS, ReHAB , Hydrophobicity Grapher etc. The curated sequence database (containing Adeno-, Arena-, Asfar-, Baculo-, Bunya-, Corona-, Filo-, Flavi-, Herpes-, Irido-, Paramyxo-, Pox- and Togaviridae) is the source of information for other programs of the workbench used for whole genome alignments, genome display or gene/protein sequence analysis. Many of these tools can also be used with manually-inputted sequence data. The workbench tools are Java-based to allow all users, regardless of computer skill-level, to access and analyze the data.
CpnDB: A Chaperonin Database
cpnDB is a curated collection of chaperonin sequence data collected from public databases or generated by a network of collaborators exploiting the cpn60 target in clinical, phylogenetic and microbial ecology studies. The database contains all available s
